So I was thinking that the current way to farm honey is inconsistent and a bit annoying after you get past the early days. You constantly have to chop down trees and this makes it that you have to constantly shift your "honey farm" further away from base. What about apiaries?
The way I see it we could build apiaries and have them surrounded with flowers. Apiary in the centre and farm plots all around on a block level lower. If it's surrounded with goldenrod it produces regular honey.
Chrysanthemums, on the other hand, make it so that it produces manuka honey.
You could also be required to find queens or drones, possibly both, for the apiary to start working.
I think this way makes it so there's some consistency with the honey, just like having raincatchers to produce clean water.

