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just get a diffing tool that understands what is being changed on a more precise methode like araxis merge
eg "commit 3 doesn't conflict directly with commit 1, but it conflicts with commit 2 which conflicts with commit 1, so commit 3 indirectly depends on commit 1"
okay instead of doing all of that, why not just keep it simple and not do any of that?
cus we may have like, a ton of changes that indirectly depend on other changes
I would simply start with the absolute simplest solution you can think of
eg
edit 0: line 1: hello
edit 1: line 2: world
edit 2: line 1: foo
edit 3: line 3: AFCD
here, we can deduce that edit 3 depends on edit 1 but does not depend on edit 2
we can deduce edit 2 depends on edit 0 but does not depend on edit 1
we can deduce edit 1 depends on edit 0 but does not depend on edit 2 as edit 2 was made after edit 1
honestly I would simply say, don't worry about it
and just have no dependency tracking