My friend @flat tapir has told me to come here to report this bug. Before the update from roughly a week ago went through, the gem bundle consumed a large amount (10-15) gems were consumed by the gem bundle and did not progress the bundle, it also ate duplicate gems.
So when the update went through, I thought it be okay now. Now every time I put gems into it, and I have to save and close the game, and when I relaunch the game the bundle will have lost the progress for uncommon gems and super rare gems. For some reason rare gems hasn't had any issues. Its the only bundle that has any issues.
This happens every time I close the game after saving.
This is the Xbox game pass version of the game on v1-162