Wrong capital ship in wrong sector (In 129A was ship from 128)

[wild loom]

Dont ask me how i get it, i literally have no idea how.

[exotic citrus]

I think it was something to do with overkill boost and sector splits

Might've never been fixed

[wild loom]

maybe

i was looking away so i have no idea

i tried to redo it but i failed

[neon tundra]

Bumping this thread as I have encountered this as well.
Attached a save, though I haven't loaded it so no clue if it will load in the bugged state.
The regular enemies are fine, but the Capital and its Hangar spawns are from the previous sector.
(I'm on sector 97A, capital is 96's)

I did I think go from sector 97B to 96 to 97A very quickly, it may have pulled back 97B's ship and spawned 96's when I had already moved into 97A?
Though it does usually despawn when you reach a choose-route thing, so not sure.